Nature – Pathogens
- Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida April 18, 2024
- Spatial analysis of dengue transmission in an endemic city in Brazil reveals high spatial structuring on local dengue transmission dynamics April 18, 2024
- Monkeypox virus genomic accordion strategies April 18, 2024
- Does nirsevimab prevent lower respiratory infections caused by respiratory syncytial virus? April 18, 2024
- A meta-analysis on the potency of foot-and-mouth disease vaccines in different animal models April 18, 2024
Nature – AMR
- A role for the stringent response in ciprofloxacin resistance in Pseudomonas aeruginosa April 13, 2024
- A folate inhibitor exploits metabolic differences in Pseudomonas aeruginosa for narrow-spectrum targeting April 9, 2024
- Author Correction: The plasmidome associated with Gram-negative bloodstream infections: a large-scale observational study using complete plasmid assemblies April 9, 2024
- Co-selection for antibiotic resistance by environmental contaminants April 1, 2024
- Colonisation of hospital surfaces from low- and middle-income countries by extended spectrum β-lactamase- and carbapenemase-producing bacteria March 29, 2024
Outbreaks
- Measles global outbreak continues to spread April 16, 2024
- Dad goes Viral on TikTok: Daughter has Pinworms April 16, 2024
CDC
- COVID-19 Vaccination Coverage, and Rates of SARS-CoV-2 Infection and COVID-19–Associated Hospitalization Among Residents in Nursing Homes — National Healthcare Safety Network, United States, October 2023–February 2024 April 18, 2024
- Durability of Original Monovalent mRNA Vaccine Effectiveness Against COVID-19 Omicron–Associated Hospitalization in Children and Adolescents — United States, 2021–2023 April 18, 2024
Food Safety News
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Category Archives: Genomics
Day Zero for Bacterial Comparative Genomics
Contributed by Darwin Bandoy DVM Learning microbiology is hard, learning genomics is hard and the learning curve is not simply exponential but factorial for learning bacterial genomics. I had the advantage of being a veterinarian with a training in microbiology … Continue reading
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Thoughts about Genome Distance Analysis for Pathogen Outbreak Isolates
Contributed by Carol Huang The recent work on bioinformatics analysis of pathogen strains from outbreaks made me consider the aspects that can be used for this type of analysis. When we are facing a pathogen outbreak, the first thing we … Continue reading
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CLC Genomics Workbench as a Tool Next Generation Sequencing Data
Contributed by Nguyet Kong CLC Genomics Workbench was designed to assist with many different Next Generation Sequencing bioinformatics applications from RNAseq, Transcriptomics, Metagenomics, Epigenomics and de novo assembly. The CLC Genomics Workbench is a user-friendly software that is easily used by … Continue reading
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Alli’s QuickStart Genomics User Guide: How To Get On The Bus!
Contributed by Allison Weis The big scary world of genomics, when first entering, can be overwhelming to say the least. But with a deep breath and these tools, you’ll soon be whizzing down ATG Avenue with the other polymerases. First, … Continue reading
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100k Genome Project named in GenomeWeb Article
Outbreak Tracking, Infectious Disease Diagnostics Becoming Key Applications for NGS Dec 28, 2015 | Monica Heger Premium NEW YORK (GenomeWeb) – In 2011, experts predicted that within five to 10 years, clinical microbiology labs would routinely sequence microbial genomes on a next-generation … Continue reading
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Recently food regulatory agencies have moved to using genomics for regulation
Contributed by Bart C. Weimer, PhD Recently food regulatory agencies have moved to using genomics for regulation. Coupled to that move the FDA announced finalization of the Foreign Supplier Verification Program using the authority extended to them via FSMA. These two major changes … Continue reading
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