Nature – Pathogens
- C-C motif chemokine receptor 2 and 7 synergistically control inflammatory monocyte recruitment but the infecting virus dictates monocyte function in the brain April 24, 2024
- Long-term monitoring of SARS-CoV-2 seroprevalence and variants in Ethiopia provides prediction for immunity and cross-immunity April 24, 2024
- Bacillus velezensis iturins inhibit the hemolytic activity of Staphylococcus aureus April 24, 2024
- A giant virus infecting the amoeboflagellate Naegleria April 24, 2024
- Age and sex influence antibody profiles associated with tuberculosis progression April 24, 2024
Nature – AMR
- Biodiversity of carbapenem-resistant bacteria in clinical samples from the Southwest Amazon region (Rondônia/Brazil) April 23, 2024
- Detection and genomic characterization of Klebsiella pneumoniae and Escherichia coli harboring tet(X4) in black kites (Milvus migrans) in Pakistan April 20, 2024
- A role for the stringent response in ciprofloxacin resistance in Pseudomonas aeruginosa April 13, 2024
- A folate inhibitor exploits metabolic differences in Pseudomonas aeruginosa for narrow-spectrum targeting April 9, 2024
- Author Correction: The plasmidome associated with Gram-negative bloodstream infections: a large-scale observational study using complete plasmid assemblies April 9, 2024
Outbreaks
- Measles global outbreak continues to spread April 16, 2024
- Dad goes Viral on TikTok: Daughter has Pinworms April 16, 2024
CDC
- COVID-19 Vaccination Coverage, and Rates of SARS-CoV-2 Infection and COVID-19–Associated Hospitalization Among Residents in Nursing Homes — National Healthcare Safety Network, United States, October 2023–February 2024 April 18, 2024
- Durability of Original Monovalent mRNA Vaccine Effectiveness Against COVID-19 Omicron–Associated Hospitalization in Children and Adolescents — United States, 2021–2023 April 18, 2024
Food Safety News
- The additive ban is halfway home in Illinois April 24, 2024
- EFSA shares 2022 data on pesticide residues in food April 24, 2024
Search
Category Archives: uncategorized
Post ASM Conference reflections
Contributed by Darwin Bandoy, DVM I participated in the 2018 ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines, September 23–26, 2018, in Tysons, Virginia and presented my work in the lab using next-generation sequencing of Campylobacter hyointestinalis. … Continue reading
Posted in uncategorized
Comments Off on Post ASM Conference reflections
Pan-Genome Analysis with Roary
Contributed by Shawn Higdon Microbial Genomics involves the isolation of microbes from environmental samples, often times with the intent of generating a pure culture comprised by an organism of a single type of strain. While many isolation events lead to … Continue reading
Posted in uncategorized
Comments Off on Pan-Genome Analysis with Roary
Diabetes and Gut Microbiome Study
Contributed by Carol Huang Metabolic disease diabetes and obesity have impacted quite some percentage of the population, over 600 million people in the world are obese, and over 400 million have diabetes. Type I diabetes often involves the loss of … Continue reading
Posted in uncategorized
Comments Off on Diabetes and Gut Microbiome Study
Reproducible Bioinformatic Workflows with Snakemake
Contributed by Shawn Higdon As I begin the newest chapter of my PhD journey – a cross-college internship at UC Davis with the Weimer lab in School of Veterinary Medicine – I am faced with new computational tasks that demand … Continue reading
Posted in uncategorized
Comments Off on Reproducible Bioinformatic Workflows with Snakemake
Non-mammals and mammal gut defense
Contributed by Nguyet Kong Chitin is a fibrous substance containing polysaccharides and form the exoskeleton of arthropods such as insects and crustaceans and are commonly found on the cell walls of fungi. Non- mammals protect their gut walls with a … Continue reading
Posted in uncategorized
Comments Off on Non-mammals and mammal gut defense
Is there only one way to fix atmospheric nitrogen?
Contributed by Shawn Higdon Biological Nitrogen fixation energy-intensive process carried out by Bacteria and Archaebacteria that have been classified across many phyla. While there is an overwhelming amount of research that describes and characterizes the process of biological nitrogen fixation … Continue reading
Posted in uncategorized
Comments Off on Is there only one way to fix atmospheric nitrogen?
Listeria Outbreak in Frozen Vegetables in Europe
Contributed by Nguyet Kong A recent Listeria outbreak in Europe has been reported due to the insufficient cooking of frozen vegetables, which led to the question if frozen vegetables even safe to eat at all. The European Food Agency is reminding people … Continue reading
Posted in uncategorized
Comments Off on Listeria Outbreak in Frozen Vegetables in Europe
Rapid Analysis of Microbial Growth Curve Data in R
Contributed by Shawn Higdon As a graduate student at the interface of plant biology and microbiology working with pure isolates, analyzing microbial growth curve data is unavoidable. I was recently in a situation where I needed to calculate the slope … Continue reading
Posted in uncategorized
Comments Off on Rapid Analysis of Microbial Growth Curve Data in R
Bacillus: The Dark Side vs. The Good Side
Contributed by Darwin Bandoy, DVM This particular talk by Bill Widner of Novozymes tantalized my interest as I only associate Bacillus with things a veterinarian must know to avoid, which is Bacillus anthracis, a deadly disease causing gram-positive bacteria in … Continue reading
Posted in uncategorized
Comments Off on Bacillus: The Dark Side vs. The Good Side
Assessing Contamination of Whole Genome Sequences for Microbial Isolates
Contributed by Shawn Higdon You are working tirelessly in the lab attempting to generate cultures of microbes that are pure, meaning a single organism comprising a single well-isolated colony. You finally have what appears to be an isolate of pure … Continue reading
Posted in uncategorized
Comments Off on Assessing Contamination of Whole Genome Sequences for Microbial Isolates