Nature – Pathogens
- Viral blips and hidden infections: pitfalls in HIV-1 prophylaxis by broadly neutralizing antibodies May 9, 2025
- Prospective multicenter study identifying prognostic biomarkers and microbial profiles in severe CAP using BALF, blood mNGS, and PBMC transcriptomics May 9, 2025
- Molecular epidemiology of Ascaris lumbricoides following multiple rounds of community-wide treatment May 9, 2025
- Epitope mapping of SARS-CoV-2 Spike protein using naturally-acquired immune responses to develop monoclonal antibodies May 9, 2025
- Global socioeconomic inequalities in vaccination coverage, supply, and confidence May 9, 2025
Nature – AMR
- Evolution of an extensively antibiotic resistant sublineage of lineage 1 of GC1 Acinetobacter baumannii May 9, 2025
- Discovery of novel DdlA inhibitors in multidrug-resistant Pseudomonas aeruginosa using virtual screening, molecular docking, and dynamics simulations May 1, 2025
- Antibiotic residues correlate with antibiotic resistance of Salmonella typhimurium isolated from edible chicken meat April 30, 2025
- Factors affecting antibiotic appropriateness in uncomplicated urinary tract infections in primary care April 29, 2025
- Global diversity and distribution of antibiotic resistance genes in human wastewater treatment systems April 29, 2025
Outbreaks
CDC
- Interim Evaluation of Respiratory Syncytial Virus Hospitalization Rates Among Infants and Young Children After Introduction of Respiratory Syncytial Virus Prevention Products — United States, October 2024–February 2025 May 8, 2025
- Trends in Suspected Fentanyl-Involved Nonfatal Overdose Emergency Department Visits, by Age Group, Sex, and Race and Ethnicity — United States, October 2020–March 2024 May 8, 2025
Food Safety News
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Category Archives: Genomics
Day Zero for Bacterial Comparative Genomics
Contributed by Darwin Bandoy DVM Learning microbiology is hard, learning genomics is hard and the learning curve is not simply exponential but factorial for learning bacterial genomics. I had the advantage of being a veterinarian with a training in microbiology … Continue reading
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Thoughts about Genome Distance Analysis for Pathogen Outbreak Isolates
Contributed by Carol Huang The recent work on bioinformatics analysis of pathogen strains from outbreaks made me consider the aspects that can be used for this type of analysis. When we are facing a pathogen outbreak, the first thing we … Continue reading
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CLC Genomics Workbench as a Tool Next Generation Sequencing Data
Contributed by Nguyet Kong CLC Genomics Workbench was designed to assist with many different Next Generation Sequencing bioinformatics applications from RNAseq, Transcriptomics, Metagenomics, Epigenomics and de novo assembly. The CLC Genomics Workbench is a user-friendly software that is easily used by … Continue reading
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Alli’s QuickStart Genomics User Guide: How To Get On The Bus!
Contributed by Allison Weis The big scary world of genomics, when first entering, can be overwhelming to say the least. But with a deep breath and these tools, you’ll soon be whizzing down ATG Avenue with the other polymerases. First, … Continue reading
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100k Genome Project named in GenomeWeb Article
Outbreak Tracking, Infectious Disease Diagnostics Becoming Key Applications for NGS Dec 28, 2015 | Monica Heger Premium NEW YORK (GenomeWeb) – In 2011, experts predicted that within five to 10 years, clinical microbiology labs would routinely sequence microbial genomes on a next-generation … Continue reading
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Recently food regulatory agencies have moved to using genomics for regulation
Contributed by Bart C. Weimer, PhD Recently food regulatory agencies have moved to using genomics for regulation. Coupled to that move the FDA announced finalization of the Foreign Supplier Verification Program using the authority extended to them via FSMA. These two major changes … Continue reading
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