Nature – Pathogens- Molecular identification of Phlebotomus kandelakii apyrase and assessment of the immunogenicity of its recombinant protein in BALB/c mice May 30, 2023
- Severe SARS-CoV-2 infection as a marker of undiagnosed cancer: a population-based study May 30, 2023
- Yersinia pestis genomes reveal plague in Britain 4000 years ago May 30, 2023
- Immunization against arthropod protein impairs transmission of rickettsial pathogen from ticks to the vertebrate host May 30, 2023
- Forecasting COVID-19 activity in Australia to support pandemic response: May to October 2020 May 30, 2023
- Nature – AMR
- Superbugs leave fingerprints May 30, 2023
- Sub-inhibitory gentamicin pollution induces gentamicin resistance gene integration in class 1 integrons in the environment May 27, 2023
- Characterization of plasmids carrying blaCTX-M genes among extra-intestinal Escherichia coli clinical isolates in Ethiopia May 26, 2023
- Identification of a mycobacterial hydrazidase, an isoniazid-hydrolyzing enzyme May 20, 2023
- Antimicrobial resistance gene lack in tick-borne pathogenic bacteria May 20, 2023
- Outbreaks
- CDC
- SURVEILLANCE SUMMARIES: Foodborne Illness Outbreaks at Retail Food Establishments — National Environmental Assessment Reporting System, 25 State and Local Health Departments, 2017–2019 May 30, 2023
- Urban and Rural Mpox Incidence Among Persons Aged 15–64 Years — United States, May 10–December 31, 2022 May 25, 2023
- Food Safety News
Category Archives: Genomics
Day Zero for Bacterial Comparative Genomics
Contributed by Darwin Bandoy DVM Learning microbiology is hard, learning genomics is hard and the learning curve is not simply exponential but factorial for learning bacterial genomics. I had the advantage of being a veterinarian with a training in microbiology … Continue reading
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Thoughts about Genome Distance Analysis for Pathogen Outbreak Isolates
Contributed by Carol Huang The recent work on bioinformatics analysis of pathogen strains from outbreaks made me consider the aspects that can be used for this type of analysis. When we are facing a pathogen outbreak, the first thing we … Continue reading
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CLC Genomics Workbench as a Tool Next Generation Sequencing Data
Contributed by Nguyet Kong CLC Genomics Workbench was designed to assist with many different Next Generation Sequencing bioinformatics applications from RNAseq, Transcriptomics, Metagenomics, Epigenomics and de novo assembly. The CLC Genomics Workbench is a user-friendly software that is easily used by … Continue reading
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Alli’s QuickStart Genomics User Guide: How To Get On The Bus!
Contributed by Allison Weis The big scary world of genomics, when first entering, can be overwhelming to say the least. But with a deep breath and these tools, you’ll soon be whizzing down ATG Avenue with the other polymerases. First, … Continue reading
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100k Genome Project named in GenomeWeb Article
Outbreak Tracking, Infectious Disease Diagnostics Becoming Key Applications for NGS Dec 28, 2015 | Monica Heger Premium NEW YORK (GenomeWeb) – In 2011, experts predicted that within five to 10 years, clinical microbiology labs would routinely sequence microbial genomes on a next-generation … Continue reading
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Recently food regulatory agencies have moved to using genomics for regulation
Contributed by Bart C. Weimer, PhD Recently food regulatory agencies have moved to using genomics for regulation. Coupled to that move the FDA announced finalization of the Foreign Supplier Verification Program using the authority extended to them via FSMA. These two major changes … Continue reading
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